Training materials
Difficulty level: Beginner
and Contributors: Celia van Gelder or Dilmurat Yusuf or Luigi Grassi or Manimozhiyan Arumugam or Michael Krone or Pinar Alper or Prof. Tom Freeman or Vilem Ded or Wolfgang Maier
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Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Mapping and molecular identification of phenotype-causing mutations
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Identification of somatic and germline variants from tumor and normal sample pairs
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis
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