Training materials
Contributors: Célia Michotey or Erik Hedman or Maria Doyle or Nate Coraor or Pavankumar Videm or Teaching materials at the Harvard Chan Bioinfor... or The Carpentries Lab or Vitor Sousa
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
carpentries-lab/metagenomics-organization
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hbctraining/BBS230B_2023
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hbctraining/RNA-seq-CB321qc_2022
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carpentries-lab/metagenomics-shell
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hbctraining/Peak_analysis_workshop
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carpentries-lab/metagenomics-R