Training materials
Difficulty level: Beginner
and Contributors: Célia Michotey or Dr. Nils Gehlenborg or Eija Korpelainen or Gildas Le Corguillé or Jean-François Dufayard or Joachim Wolff or Kaivan Kamali
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hands-on tutorial
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
• beginnerEpigenomics Epigenetics -
hands-on tutorial
DNA Methylation data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Image classification in Galaxy with fruit 360 dataset
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Mass spectrometry: LC-MS analysis
• beginnerMetabolomics -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Deep Learning (Part 2) - Recurrent neural networks (RNN)
• beginnerStatistics and probability Statistics and machine learning -
slides
Recurrent neural networks (RNN) Deep Learning - Part 2
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Deep Learning (Part 1) - Feedforward neural networks (FNN)
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Deep Learning (Part 3) - Convolutional neural networks (CNN)
• beginnerStatistics and probability Statistics and machine learning