Training materials
Contributors: Célia Michotey or Data Carpentry or Erik Hedman or Maria Doyle or Nate Coraor or Pavankumar Videm or Teaching materials at the Harvard Chan Bioinfor... or The Carpentries Lab or Vitor Sousa
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
carpentries-lab/metagenomics-organization
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hbctraining/BBS230B_2023
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hbctraining/RNA-seq-CB321qc_2022
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carpentries-lab/metagenomics-shell
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hbctraining/Peak_analysis_workshop
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carpentries-lab/metagenomics-R