Training materials
Contributors: Branka Franicevic or Dave Clements or Dr. Stephen David Laycock or Erwan Corre or Espen Mikal Robertsen or Joachim Wolff or Michael Ball or Sonika Tyagi or Vicky Schneider or Wolfgang Maier
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hands-on tutorial
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format
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Video
RDMbites | Sequencing Data QC: FastQC metrics
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Video
RDMbites | RNAseq expression data
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hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology