Training materials
Difficulty level: Intermediate
and Contributors: Branka Franicevic or Bérénice Batut or Daniel Faria or Delphine Lariviere or Our list of contributors can be found on our co... or Pinar Alper
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hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
FREE online course
From Swab to Server: Testing, Sequencing, and Sharing During a Pandemic
•• intermediatemetadata Sequencing genomics Genomic data data quality scientific quality assurance data sharing ethics data ethics public health coronavirus sars-cov-2 covid-19 data linkage -
Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ADER18S - Analysis of Differential Expression with RNAseq (Second course in 2018)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ADER18F - Analysis of Differential Expression with RNAseq (First course in 2018)
•• intermediateRNA-Seq Genomics RNA