Training materials
Scientific topics: Data management or Metagenomics or Sequence analysis
and Contributors: Brane Leskosek or Lorna Richardson or Saskia Hiltemann
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Galaxy Installation with Ansible
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
slides
Introduction to 'Metagenomics'
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slides
Mapping
• beginnerSequence analysis -
Tutorial
MGnify quick tour
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course materials, Training materials, Slides
Implementation of Data Management Plans & Data Stewardship in practice