Training materials
Contributors: Brane Leskosek or Branka Franicevic or Dr. Roy Ruddle or Emily Angiolini or Erwan Corre or Jaime Morris or Marius van den Beek or Prof. David Willaim Burt or Prof. Tom Freeman
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hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format
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Video
RDMbites | Sequencing Data QC: FastQC metrics
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Video
RDMbites | RNAseq expression data
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote