Training materials
Scientific topics: Data management or Genomic variation or Metagenomics or Sequence analysis
and Contributors: Brane Leskosek or Bérénice Batut
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hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
slides
Introduction to 'Variant Analysis'
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slides
Introduction to 'Metagenomics'
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hands-on tutorial
Mapping
• beginnerSequence analysis Mapping -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis -
course materials, Training materials, Slides
Implementation of Data Management Plans & Data Stewardship in practice