Training materials
Scientific topics: Microbial ecology
and Contributors: Björn Grüning or Celia van Gelder or Dr. Simon Tomlinson or Erik Hjerde or Manimozhiyan Arumugam or Marek Suchanek or Ms. Yo Yehudi or Munazah Andrabi or Nils Peder Willassen or Wolfgang Maier
-
hands-on tutorial
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis Pathogens detection Phylogenetic tree cyoa microgalaxy -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining