Training materials
Contributors: Björn Grüning or Celia van Gelder or Dr. Simon Tomlinson or Erik Hjerde or Lucille Delisle or Manimozhiyan Arumugam or Marek Suchanek or Mehmet Tekman or Ms. Yo Yehudi or Munazah Andrabi or Nils Peder Willassen or SIB Swiss Institute of Bioinformatics
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
sib-swiss/spatial-transcriptomics-training
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hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
sib-swiss/reproducible-analysis-training
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sib-swiss/ena-seqdata-training
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sib-swiss/Introduction-FAIR-RDM-DMP
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sib-swiss/Data-analysis-in-practice