Training materials
Contributors: Björn Grüning or Celia van Gelder or Coline Royaux or Cristóbal Gallardo or Jessica Lindvall or Marek Vrbacky or Nils Peder Willassen or Pip Griffin or Robert Andrews
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hands-on tutorial
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
video
RDMbites | Analysis Organisation
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video
RDMbites | RNAseq data submission: ArrayExpress
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video
RDMbites | Metadata: where to find published ontologies
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video
RDMbites | High-throughput sequencing data repositories
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video
RDMbites | Making code available in a repository
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video
RDMbites | Package and environment management systems
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video
RDMbites | Improve your analysis reproducibility and data provenance with computational notebooks
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video
RDMbites | RNAseq data submission: metadata