Training materials
Scientific topics: Algorithms
and Contributors: Bioinformatics, Rockefeller University or Helena Rasche or Jyoti Khadake or Michael Ball or Paul Yorke or Prof. Michael J E Sternberg or Simon Bray or Stéphanie Robin or Vicky Schneider or carpentries-incubator
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hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Python - Coding Style
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy jupyter-notebook -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
ToolFactory: Generating Tools From Simple Scripts
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Contributing to BioBlend as a developer
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
CLI Educational Game - Bashcrawl
•• intermediateSoftware engineering Foundations of Data Science bash game jupyter-notebook -
hands-on tutorial
Python - Subprocess
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Version Control with Git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science