Training materials
Contributors: Bioinformatics, Rockefeller University or David Bouyssié or Delphine Lariviere or Dr. Bernard de Bono or Erwan Corre or carpentries-incubator
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hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
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hands-on tutorial
Hands-on for 'Use Jupyter notebooks in Galaxy' tutorial
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slides
Slides for 'Essential genes detection with Transposon insertion sequencing' tutorial
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slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
slides
Slides for 'Unicycler Assembly' tutorial
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hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control