Training materials
Contributors: Bioinformatics, Rockefeller University or Bérénice Batut or Chris Evelo or Data Carpentry or Instituto Gulbenkian de Ciência or Jean-François Dufayard or Mehmet Tekman
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
GTPB/ABSTAT18
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RockefellerUniversity/RU_tidyverse_core
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GTPB/IBIP19
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GTPB/PDA19
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RockefellerUniversity/RU_reproducibleR
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RockefellerUniversity/IGV_course
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RockefellerUniversity/RU_GenomicVariants
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RockefellerUniversity/RU_VisualizingGenomicsData