Training materials
Contributors: Beatriz Serrano-Solano or Branka Franicevic or Donny Vrins or Dr. Scooter Morris or James Johnson or Maria Lehtivaara or Marius van den Beek or Stéphanie Robin
-
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
Video
RDMbites | Sequencing Data QC: causes and consequences
-
Video
RDMbites | Sequencing data QC: trimming
-
Video
RDMbites | FASTQ format
-
Video
RDMbites | Sequencing Data QC: FastQC metrics
-
Video
RDMbites | RNAseq expression data
-
hands-on tutorial
Teaching Python
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Multiprocessing
••• advancedSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook