Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Beatriz Alfaro Serrano, BNN or Collins Assisi or Cyril Monjeaud or Daniel Sobral or Delphine Lariviere or Ph.D. or Sergio Martínez Cuesta
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hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial
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hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
Contributing with GitHub via command-line
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Use Jupyter notebooks in Galaxy
• beginnerUsing Galaxy and Managing your Data -
slides
Slides for 'Essential genes detection with Transposon insertion sequencing' tutorial
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slides
Prerequisites for building software/conda packages
• beginnerSoftware engineering Development in Galaxy -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly
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