Training materials
Scientific topics: Sequence assembly or Workflows
and Contributors: Beatriz Alfaro Serrano, BNN or CRUK CI Bioinformatics Core or Collins Assisi or Delphine Lariviere or Ph.D. or Sergio Martínez Cuesta
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bioinformatics-core-shared-training/nextflow_september_2021
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hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote