Training materials
Contributors: Bazante Sanders or Dr. Martin Graham or Michael Krone or Munazah Andrabi or Prof. Tom Freeman or Simon Bray or Wendi Bacon or Wolmar Nyberg Åkerström
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Scanpy Parameter Iterator
• beginnerSingle Cell -
video
RDMbites | Decolonising data management in the biosciences
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video
RDMbites | Data management and disabilities
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video
RDMbites | EDIJ and decolonisation in data management
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video
RDMbites | EDIJ and decolonisation in data management: why should I care?
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hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan