Training materials
Scientific topics: Multiple drug resistance (MDR)
and Contributors: Bazante Sanders or Björn Grüning or Charlotte Soneson or Dr. Scooter Morris or Instituto Gulbenkian de Ciência or Jamie Edwards or Marek Suchanek or Nicola Mulder or Robert Andrews or The Carpentries
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore