Training materials
Difficulty level: Beginner
and Contributors: Bazante Sanders or Björn Grüning or Célia Michotey or Daniel Neves or Dr. Nils Gehlenborg or Laura Leroi or Maria Doyle
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
hands-on tutorial
Teaching Python
• beginnerContributing to the Galaxy Training Material -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics