Training materials
Difficulty level: Beginner
and Contributors: Bang Wong or Björn Grüning or Celia van Gelder or Daniel Sobral or Emily Angiolini or Erasmus+ Programme or Jamie Edwards or Manimozhiyan Arumugam or Marek Vrbacky or Sabine Österle or Taner Sen
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Creating Interactive Galaxy Tours
• beginnerContributing to the Galaxy Training Material