Training materials
Difficulty level: Intermediate
and Contributors: Bang Wong or Bérénice Batut or Dr. Iain Milne or Munazah Andrabi or Simon Gladman or carpentries-incubator
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hands-on tutorial
Sequence data submission to ENA
•• intermediateFAIR ENA sequence datasets -
Video
RDMbites: Image data
•• intermediateimaging data management -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly