Training materials
Scientific topics: Histone modification or Mutation or Software engineering
and Contributors: Bérénice Batut or Dave Clements or Melanie Foell or Michael Ball or Michael Krone or Oliver Davis or Pavel Dvorak or Prof. Tom Freeman or bioinformatics.ca
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bioinformaticsdotca/EPI_2023
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hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Advanced R in Galaxy
•• intermediateSoftware engineering Foundations of Data Science R -
hands-on tutorial
R basics in Galaxy
• beginnerSoftware engineering Foundations of Data Science R interactive-tools -
slides
Tool Shed: sharing Galaxy tools
• beginnerSoftware engineering Development in Galaxy -
slides
Galaxy Interactive Tours
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Introduction to 'Variant Analysis'