Training materials
Difficulty level: Intermediate
and Contributors: Bérénice Batut or Christine Balmer, UKCEH or David Bouyssié or Eija Korpelainen or Gildas Le Corguillé or Simon Gladman
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hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
Documentation, Exercise, Handout, Scripts
IBIP19 - Integrative Biological Interpretation using Proteomics (2019)
•• intermediateProteomics -
course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq