Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Avans Hogeschool or Julien Seiler or Mehmet Tekman or Sundeep Agarwal or Wolfgang Maier
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hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Automating Galaxy workflows using the command line
• beginnerUsing Galaxy and Managing your Data covid19 variant-analysis workflows -
hands-on tutorial
Removal of human reads from SARS-CoV-2 sequencing data
•• intermediateSequence analysis covid19 -
hands-on tutorial
Understanding Barcodes
• beginnerTranscriptomics Single Cell -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
slides
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics Single Cell -
slides
Dealing with Cross-Contamination in Fixed Barcode Protocols
• beginnerTranscriptomics Single Cell -
slides
An introduction to scRNA-seq data analysis
•• intermediateTranscriptomics Single Cell