Training materials
Contributors: Avans Hogeschool or Delphine Lariviere or Dr. Roy Ruddle or Emily Angiolini or Florian Christoph Sigloch or Jalview Coordinator or Jamie Edwards or Prof. Tom Freeman or Simon Gladman or Susan Coort or Wolfgang Maier
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediatevariant-analysis virology -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Mapping and molecular identification of phenotype-causing mutations
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Identification of somatic and germline variants from tumor and normal sample pairs
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial