Training materials
Difficulty level: Beginner
and Contributors: Avans Hogeschool or Bilal Shaikh or Célia Michotey or Daniel Sobral or Laura Leroi or Maria Lehtivaara or Saskia Hiltemann
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Set up a Galaxy for Training
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Generic plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Creating Interactive Galaxy Tours
• beginnerContributing to the Galaxy Training Material