Training materials
Contributors: Avans Hogeschool or Bang Wong or Björn Grüning or Dr. Alexander Lex or Helena Rasche or Jan Slifka or Oliver Davis or Pavankumar Videm or PhD BSc FSB or Sabine Österle
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hands-on tutorial
FAIR Galaxy Training Material
• beginnerFAIR Galaxy Training material -
hands-on tutorial
FAIR data management solutions
•• intermediateFAIR Data management -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell ATAC-seq Datasets' tutorial
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hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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slides
Slides for 'Galaxy from an administrator's point of view' tutorial
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'Exome sequencing data analysis for diagnosing a genetic disease' tutorial