Training materials
Contributors: Avans Hogeschool or Bang Wong or Björn Grüning or Daniel Blankenberg or Dr. Alexander Lex or Jan Slifka or Lucille Delisle or Oliver Davis or Pavankumar Videm or PhD BSc FSB or Sabine Österle
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hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell ATAC-seq Datasets' tutorial
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy