Training materials
Contributors: Armando Arredondo Soto or Björn Grüning or Bérénice Batut or NBIS - National Bioinformatics Infrastructure Sweden or Youri Hoogstrate or Yvan Le Bras or Yvonne Kallberg
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hands-on tutorial
Ecoregionalization workflow tutorial
• beginnerEcology EBV workflow earth-system ecology gbif interactive-tools modeling ocean taxonomic data -
hands-on tutorial
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
hands-on tutorial
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
hands-on tutorial
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
NBISweden/module-r-intro-dm-practices
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NBISweden/module-openrefine-dm-practices
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NBISweden/module-data-publication-dm-practices
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NBISweden/module-metadata-dm-practices
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NBISweden/module-organising-data-dm-practices