Training materials
Difficulty level: Beginner
and Contributors: Aravind Venkatesan or Bruna Piereck Moura or Christopher Barnett or David Philip Judge or Dr. Nils Gehlenborg or Erwan Corre or Fotis E. Psomopoulos
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
e-learning
Introduction to Linux command line
• beginnerOperating system name Linux -
hands-on tutorial
Teaching experiences
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Live Coding is a Skill
• beginnerTeaching and Hosting Galaxy training -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Version Control with Git
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerdata-science jupyter-notebook
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