Training materials
Contributors: Anup Kumar or Elin Kronander or Gautier Sarah or Joachim Wolff or Pinar Alper or Saskia Hiltemann or Sundeep Agarwal
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hands-on tutorial
Creating a Special Interest Group
• beginnerGalaxy Community Building -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
learnbyexample/100_page_python_intro
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learnbyexample/cli_text_processing_coreutils
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learnbyexample/learn_gnused
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learnbyexample/learn_gnugrep_ripgrep