Training materials
Contributors: Anup Kumar or Daniel Blankenberg or Daniel Faria or Dr. Konstantinos Sidiropoulos or Mehmet Tekman or Munazah Andrabi or Stéphanie Robin or Yvan Le Bras
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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hands-on tutorial
Champs blocs indicators
• beginnerEcology -
Video
RDMbites | Characters to use and avoid in filenames
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Video
RDMbites | Machine and human readable file naming
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Video
RDMbites | REDCap: how to run data quality checks