Training materials
Contributors: Anup Kumar or Computational Biology and Bioinformatics at UCL... or Dr. Simon Li or Jason Williams or Lieven Clement or Michael Krone or Ms. Sejal Modha or Pavankumar Videm or Prof. Jessie Kennedy or Prof. Tom Freeman or Software Carpentry
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
UCLouvain-CBIO/LSTAT2340
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UCLouvain-CBIO/WSBIM1207
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UCLouvain-CBIO/WSBIM2122
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UCLouvain-CBIO/WSBIM1322
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swcarpentry/matlab-novice-inflammation
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swcarpentry/make-novice