Training materials
Contributors: Anup Kumar or Christopher Barnett or Dan Bolser or Instituto Gulbenkian de Ciência or Jalview Coordinator or Michael Ball or Pavankumar Videm or The Carpentries Lab or Vicky Schneider
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
GTPB/ABSTAT18
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carpentries-lab/metagenomics-organization
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GTPB/IBIP19
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GTPB/PDA19
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carpentries-lab/metagenomics-shell
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GTPB/PSLS20