Training materials
Scientific topics: Biological sequences
and Contributors: Anup Kumar or Armin Fuchs or Dan Bolser or Delphine Lariviere or Eija Korpelainen or Eva Freyhult or Helena Rasche or Michael Krone or NBIS - National Bioinformatics Infrastructure S... or Oliver Davis or Prof. Tom Freeman
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Screening assembled genomes for contamination using NCBI FCS
• beginnerSequence analysis -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Mapping
• beginnerSequence analysis Mapping