Training materials
Scientific topics: Assembly
and Contributors: Anton Nekrutenko or Dr. Sean I O’Donoghue or Michael Ball or Prof. Tom Freeman or Wolfgang Maier
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hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• intermediateSequence assembly Assembly covid19 -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote