Training materials
Resource type: hands-on tutorial
and Contributors: Anton Nekrutenko or Dr. Colin Combe or Dr. Ting Wang or Mallory Freeberg or Michael Ball or PhD BSc FSB or Simon Bray or Vicky Schneider
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hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Calling very rare variants
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Contributing to BioBlend as a developer
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
Differential abundance testing of small RNAs
• beginnerTranscriptomics -
hands-on tutorial
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics