Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Anton Nekrutenko or Daniel Sobral or Emily Angiolini or Luigi Grassi or Marie Josse or Martin Krzywinski or Matthias Fahrner or Nicola Soranzo or Prof. Tom Freeman or Rafael C Jimenez
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hands-on tutorial
Champs blocs indicators
• beginnerEcology -
hands-on tutorial
Hands-on for 'Visualize EBV cube data with Panoply netCDF viewer' tutorial
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hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Calling very rare variants
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics