Training materials
Contributors: Anton Nekrutenko or Avans Hogeschool or Björn Grüning or Delphine Lariviere or Derek Wright or Emma Leith or Praveen Kumar or The Carpentries
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
slides
Galaxy from an administrator's point of view
• beginnerGalaxy Server administration -
hands-on tutorial
Live Coding is a Skill
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Calling very rare variants
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis