Training materials
Contributors: Anthony Bretaudeau or Coline Royaux or Collins Assisi or Dr. Sean I O’Donoghue or Dr. Simon Tomlinson or Fotis E. Psomopoulos or Mehmet Tekman or Sergio Martínez Cuesta
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
semacu/20180223_ORCID_Chemistry_Cambridge
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semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge
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semacu/20180726_TrainMalta_Unix_R
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semacu/20190927_IntroductionGithub_HDRUK
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semacu/20171024_GitHub_Chemistry_Cambridge
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semacu/20181003_Intro_git_GitHub
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial