Training materials
Difficulty level: Beginner
and Contributors: Anthony Bretaudeau or Celia van Gelder or Eija Korpelainen or Florian Christoph Sigloch or Fotis E. Psomopoulos or Manimozhiyan Arumugam or Paul Yorke
-
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Label-free versus Labelled - How to Choose Your Quantitation Method' tutorial
• beginnerproteomics DDA -
hands-on tutorial
Hands-on for 'Peptide and Protein ID using SearchGUI and PeptideShaker' tutorial
• beginnerproteomics DDA HeLa -
hands-on tutorial
Hands-on for 'Protein FASTA Database Handling' tutorial
• beginnerproteomics DDA -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerdata-science jupyter-notebook -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq
- 1
- 2