Training materials
Contributors: Anthony Bretaudeau or Bérénice Batut or Collins Assisi or Dannon Baker or Erasmus+ Programme or Hélène Chiapello or Mehmet Tekman or SIB Swiss Institute of Bioinformatics
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
sib-swiss/spatial-transcriptomics-training
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sib-swiss/reproducible-analysis-training
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sib-swiss/ena-seqdata-training
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sib-swiss/Introduction-FAIR-RDM-DMP
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sib-swiss/Data-analysis-in-practice
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sib-swiss/multiomics-data-analysis-and-integration-training
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sib-swiss/unix-first-steps-training
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sib-swiss/enrichment-analysis-training