Training materials
Difficulty level: Beginner
and Contributors: Anthony Bretaudeau or Avans Hogeschool or Chris Evelo or Dr. Simon Tomlinson or Frederik Coppens or Marius van den Beek or Michael Krone or Prof. Tom Freeman
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'CLI basics' tutorial
• beginnerdata-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced SQL' tutorial
• beginnerdata-science SQL jupyter-notebook -
hands-on tutorial
Hands-on for 'Introduction to SQL' tutorial
• beginnerdata-science SQL jupyter-notebook -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization