Training materials
Resource type: slides
and Contributors: Anne Siegel or Anthony Bretaudeau or Cristóbal Gallardo or David Bouyssié or James Johnson or Lucille Delisle or Rafael C Jimenez
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Prerequisites for building software/conda packages
• beginnerSoftware engineering Development in Galaxy -
slides
Tool Shed: sharing Galaxy tools
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Introduction to ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• beginnerSequence assembly Assembly covid19 -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics
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