Training materials
Contributors: Anne Pajon or Anton Nekrutenko or Felix Almonte or Gildas Le Corguillé or Matthias Fahrner or Michael Ball or Prof. Michael J E Sternberg or Rafael C Jimenez or Vicky Schneider
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hands-on tutorial
Hands-on for 'Comparative gene analysis in unannotated genomes' tutorial
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Calling variants in non-diploid systems' tutorial
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hands-on tutorial
Calling very rare variants
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Making sense of a newly assembled genome' tutorial
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hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of TMT data' tutorial