Training materials
Difficulty level: Beginner
and Contributors: Anne Fouilloux or Eija Korpelainen or Emily Angiolini or Erwan Corre or Matthias Fahrner or Ms. Sejal Modha or Prof. Tom Freeman or Susan Coort
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Label-free data analysis using MaxQuant' tutorial
• beginnerproteomics DDA label-free -
hands-on tutorial
How to reproduce published Galaxy analyses
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq
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