Training materials
Contributors: Anne Fouilloux or Dr. Sean I O’Donoghue or Erik Hedman or Florian Christoph Sigloch or Janick Mathys or Pavankumar Videm or Simon Gladman or cambiotraining
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
cambiotraining/corestats
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cambiotraining/python-data-science
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cambiotraining/hpc-intro
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cambiotraining/sars-cov-2-genomics
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cambiotraining/intro-machine-learning
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hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis