Training materials
Scientific topics: Genomics
and Contributors: Anne Fouilloux or Anton Nekrutenko or CRUK CI Bioinformatics Core or Dr. Nils Gehlenborg or Eija Korpelainen @eija, ekorpelainen@gmail.com or Melanie Föll or Sergio Martínez Cuesta
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bioinformatics-core-shared-training/cruk-summer-school-2020
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hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote